cv.bib

@article{MYDB:journals/jda/RussoOl07,
  author = {Lu\'{i}s M. S. Russo and
               Arlindo L. Oliveira},
  title = {Efficient Generation of Super Condensed Neighborhoods},
  journal = {Journal of Discrete Algorithms},
  year = {2007},
  optkey = {},
  volume = {5},
  number = {3},
  pages = {501--513},
  month = {September},
  optnote = {},
  optannote = {},
  publisher = {Elsevier Science Publishers},
  ps = {jda07/paper.ps},
  pdf = {jda07/paper.pdf},
  http = {jda07/index.html},
  doi = {http://dx.doi.org/10.1016/j.jda.2006.10.005}
}

@article{MYDB:journals/jir/RussoOl07,
  author = {Lu\'{i}s M. S. Russo and
                 Arlindo L. Oliveira},
  title = {A Compressed Self-index Using a {Z}iv-{L}empel Dictionary.},
  journal = {Journal of Information Retrieval},
  year = {2008},
  optkey = {},
  optvolume = {5},
  optnumber = {3},
  optpages = {501--513},
  optmonth = {September},
  note = {Special issue SPIRE 2006},
  annote = {(Aceite)},
  optpublisher = {Elsevier Science Publishers},
  ps = {jir07/paper.ps},
  pdf = {jir07/paper.pdf},
  http = {jir07/index.html},
  doi = {http://dx.doi.org/10.1007/s10791-008-9050-3}
}

@article{a2031105,
  author = {Russo, Lu\'{i}s M. S. and Navarro, Gonzalo and Oliveira, Arlindo L. and Morales, Pedro},
  title = {Approximate String Matching with Compressed Indexes},
  journal = {Algorithms},
  volume = {2},
  year = {2009},
  number = {3},
  pages = {1105--1136},
  url = {http://www.mdpi.com/1999-4893/2/3/1105},
  issn = {1999-4893},
  doi = {10.3390/a2031105},
  http = {http://www.mdpi.com/1999-4893/2/3/1105},
  ps = {mdpi09/paper.ps},
  pdf = {mdpi09/paper.pdf}
}

@article{DBLP:journals/bmcbi/FernandesFROF11,
  author = {Francisco Fernandes and
               Paulo G. S. da Fonseca and
               Lu\'{i}s M. S. Russo and
               Arlindo L. Oliveira and
               Ana T. Freitas},
  title = {Efficient alignment of pyrosequencing reads for re-sequencing
               applications},
  journal = {BMC Bioinformatics},
  volume = {12},
  year = {2011},
  pages = {163},
  ee = {http://dx.doi.org/10.1186/1471-2105-12-163},
  bibsource = {DBLP, http://dblp.uni-trier.de}
}

@article{RNOtalg11,
  title = {Fully-Compressed Suffix Trees},
  author = {{Lu\'{i}s S. Russo} and Gonzalo Navarro and Arlindo L. Oliveira},
  journal = {ACM Transactions on Algorithms (TALG)},
  volume = 7,
  number = 4,
  pages = {article 53},
  note = {35 pages},
  year = 2011
}

@article{LuisMS201230,
  title = {Monge properties of sequence alignment},
  journal = {Theoretical Computer Science},
  volume = {423},
  number = {0},
  pages = {30 - 49},
  year = {2012},
  note = {},
  issn = {0304-3975},
  doi = {10.1016/j.tcs.2011.12.068},
  url = {http://www.sciencedirect.com/science/article/pii/S0304397511010449},
  author = {Lu\'{i}s M.S. and Russo}
}

@article{22551152,
  author = {Vinga, Susana and Carvalho, Alexandra and Francisco, Alexandre and Russo, Lu\'{i}s and Almeida, Jonas},
  title = {Pattern matching through Chaos Game Representation: bridging numerical and discrete data structures for biological sequence analysis},
  journal = {Algorithms for Molecular Biology},
  volume = {7},
  year = {2012},
  number = {1},
  pages = {10},
  url = {http://www.almob.org/content/7/1/10},
  doi = {10.1186/1748-7188-7-10},
  pubmedid = {22551152},
  issn = {1748-7188}
}

@article{Navarro2012,
  title = {Space-efficient data-analysis queries on grids},
  journal = {Theoretical Computer Science},
  volume = {1},
  year = {2012},
  issn = {0304-3975},
  doi = {10.1016/j.tcs.2012.11.031},
  url = {http://www.sciencedirect.com/science/article/pii/S0304397512010742},
  author = {Gonzalo Navarro and Yakov Nekrich and Lu\'{i}s M.S. Russo}
}

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